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locimend

locimend is a tool that corrects DNA sequencing errors using Deep Learning.

Technologies

Tensorflow
Biopython

Installation

This project uses Nix to ensure reproducible builds.

Install Nix (compatible with MacOS, Linux and WSL):

curl -L https://nixos.org/nix/install | sh

Clone the repository:

git clone https://git.coolneng.duckdns.org/coolneng/locigenesis

Change the working directory to the project:

cd locigenesis

Enter the nix-shell:

nix-shell

After running these commands, you will find yourself in a shell that contains all the needed dependencies.