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Update README 2021-06-03 18:56:18 +02:00
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# locimend
locimend is a tool that corrects DNA sequencing errors using Deep Learning.
## Technologies
- Tensorflow
- Biopython
## Installation
This project uses [Nix](https://nixos.org/) to ensure reproducible
builds.
1. Install Nix (compatible with MacOS, Linux and
[WSL](https://docs.microsoft.com/en-us/windows/wsl/about)):
```bash
curl -L https://nixos.org/nix/install | sh
```
2. Clone the repository:
```bash
git clone https://git.coolneng.duckdns.org/coolneng/locigenesis
```
3. Change the working directory to the project:
```bash
cd locigenesis
```
4. Enter the nix-shell:
```bash
nix-shell
```
After running these commands, you will find yourself in a shell that
contains all the needed dependencies.

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* locimend
locimend is a tool that corrects DNA sequencing errors.