coolneng
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  • Joined on 2019-11-16
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coolneng pushed to master at coolneng/locigenesis 2021-04-21 22:12:53 +02:00
81ebd4fbbe Rename function arguments to improve readability
coolneng pushed to master at coolneng/locigenesis 2021-04-21 21:29:46 +02:00
659f0097d8 Get V and J sequences from sequence ID
coolneng pushed to master at coolneng/locigenesis 2021-04-21 21:03:12 +02:00
fb5d781c66 Add space to sequence ID for easier parsing
coolneng pushed to master at coolneng/locigenesis 2021-04-21 20:12:23 +02:00
35406497a3 Format generation script
b771071974 Remove csv from gitignore
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coolneng pushed to master at coolneng/locigenesis 2021-04-21 20:09:14 +02:00
2a997a3e5c Rename sequencing_runs to number_of_reads
coolneng pushed to master at coolneng/locigenesis 2021-04-21 20:02:55 +02:00
1020d610d3 Run CuReSim n times for each sequence
5154a35fca Remove sequencing runs argument from repertoire
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coolneng pushed to master at coolneng/locigenesis 2021-04-21 18:51:14 +02:00
18ffbf9a75 Add v_call and j_call to sequence ID
282b86e31b Add v_call and j_call to sequence ID
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coolneng pushed to master at coolneng/locigenesis 2021-04-21 18:46:14 +02:00
282b86e31b Add v_call and j_call to sequence ID
coolneng pushed to master at coolneng/curriculum-vitae 2021-04-21 01:36:50 +02:00
ff54cc690d Elaborate on the activities at COACE
5cf06ec01f Add ZFS to tools
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coolneng pushed to master at chavalitros/MH-P1 2021-04-20 22:19:58 +02:00
3aaf328a2c Add results analysis to summary
coolneng pushed to master at chavalitros/MH-P1 2021-04-20 21:41:35 +02:00
40848fdd31 Add algorithm results Excel file
coolneng pushed to master at chavalitros/MH-P1 2021-04-20 21:22:07 +02:00
0e995eda27 Add batch execution explanation to summary
coolneng pushed to master at coolneng/doom.d 2021-04-20 21:21:16 +02:00
3b319eb911 All color for URLs in eisvogel template snippet
coolneng pushed to master at chavalitros/MH-P1 2021-04-20 18:14:55 +02:00
6b67e6db34 Craft duplicate check before insert
coolneng pushed to master at chavalitros/MH-P1 2021-04-20 13:53:38 +02:00
5b63b993df Add execution time meand and standard deviation
coolneng pushed to master at chavalitros/MH-P1 2021-04-20 13:22:19 +02:00
b8b812d011 Write results to an Excel file
coolneng pushed to master at chavalitros/MH-P1 2021-04-20 11:59:45 +02:00
3e0dbb9168 Populate results with mean and std deviation
coolneng pushed to master at chavalitros/MH-P1 2021-04-20 01:21:43 +02:00
9ab8ec3d8a Add execution script
coolneng pushed to master at chavalitros/MH-P1 2021-04-20 00:02:47 +02:00
ed76d07345 Add user manual to summary
coolneng pushed to master at chavalitros/MH-P1 2021-04-19 22:16:14 +02:00
94570601e1 Add algorithms pseudocode in the summary