914 lines
52 KiB
TOML
914 lines
52 KiB
TOML
[[package]]
|
|
name = "absl-py"
|
|
version = "0.12.0"
|
|
description = "Abseil Python Common Libraries, see https://github.com/abseil/abseil-py."
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "*"
|
|
|
|
[package.dependencies]
|
|
six = "*"
|
|
|
|
[[package]]
|
|
name = "asgiref"
|
|
version = "3.4.1"
|
|
description = "ASGI specs, helper code, and adapters"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=3.6"
|
|
|
|
[package.extras]
|
|
tests = ["pytest", "pytest-asyncio", "mypy (>=0.800)"]
|
|
|
|
[[package]]
|
|
name = "astunparse"
|
|
version = "1.6.3"
|
|
description = "An AST unparser for Python"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "*"
|
|
|
|
[package.dependencies]
|
|
six = ">=1.6.1,<2.0"
|
|
|
|
[[package]]
|
|
name = "biopython"
|
|
version = "1.78"
|
|
description = "Freely available tools for computational molecular biology."
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=3.6"
|
|
|
|
[package.dependencies]
|
|
numpy = "*"
|
|
|
|
[[package]]
|
|
name = "cachetools"
|
|
version = "4.2.2"
|
|
description = "Extensible memoizing collections and decorators"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "~=3.5"
|
|
|
|
[[package]]
|
|
name = "certifi"
|
|
version = "2020.12.5"
|
|
description = "Python package for providing Mozilla's CA Bundle."
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "*"
|
|
|
|
[[package]]
|
|
name = "chardet"
|
|
version = "4.0.0"
|
|
description = "Universal encoding detector for Python 2 and 3"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
|
|
|
|
[[package]]
|
|
name = "click"
|
|
version = "8.0.1"
|
|
description = "Composable command line interface toolkit"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=3.6"
|
|
|
|
[package.dependencies]
|
|
colorama = {version = "*", markers = "platform_system == \"Windows\""}
|
|
|
|
[[package]]
|
|
name = "colorama"
|
|
version = "0.4.4"
|
|
description = "Cross-platform colored terminal text."
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
|
|
|
|
[[package]]
|
|
name = "fastapi"
|
|
version = "0.66.0"
|
|
description = "FastAPI framework, high performance, easy to learn, fast to code, ready for production"
|
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category = "main"
|
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optional = false
|
|
python-versions = ">=3.6"
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|
|
|
[package.dependencies]
|
|
pydantic = ">=1.6.2,<1.7 || >1.7,<1.7.1 || >1.7.1,<1.7.2 || >1.7.2,<1.7.3 || >1.7.3,<1.8 || >1.8,<1.8.1 || >1.8.1,<2.0.0"
|
|
starlette = "0.14.2"
|
|
|
|
[package.extras]
|
|
all = ["requests (>=2.24.0,<3.0.0)", "aiofiles (>=0.5.0,<0.6.0)", "jinja2 (>=2.11.2,<3.0.0)", "python-multipart (>=0.0.5,<0.0.6)", "itsdangerous (>=1.1.0,<2.0.0)", "pyyaml (>=5.3.1,<6.0.0)", "graphene (>=2.1.8,<3.0.0)", "ujson (>=4.0.1,<5.0.0)", "orjson (>=3.2.1,<4.0.0)", "email_validator (>=1.1.1,<2.0.0)", "uvicorn[standard] (>=0.12.0,<0.14.0)", "async_exit_stack (>=1.0.1,<2.0.0)", "async_generator (>=1.10,<2.0.0)"]
|
|
dev = ["python-jose[cryptography] (>=3.1.0,<4.0.0)", "passlib[bcrypt] (>=1.7.2,<2.0.0)", "autoflake (>=1.3.1,<2.0.0)", "flake8 (>=3.8.3,<4.0.0)", "uvicorn[standard] (>=0.12.0,<0.14.0)", "graphene (>=2.1.8,<3.0.0)"]
|
|
doc = ["mkdocs (>=1.1.2,<2.0.0)", "mkdocs-material (>=7.1.9,<8.0.0)", "markdown-include (>=0.6.0,<0.7.0)", "mkdocs-markdownextradata-plugin (>=0.1.7,<0.2.0)", "typer-cli (>=0.0.12,<0.0.13)", "pyyaml (>=5.3.1,<6.0.0)"]
|
|
test = ["pytest (==5.4.3)", "pytest-cov (==2.10.0)", "pytest-asyncio (>=0.14.0,<0.15.0)", "mypy (==0.812)", "flake8 (>=3.8.3,<4.0.0)", "black (==20.8b1)", "isort (>=5.0.6,<6.0.0)", "requests (>=2.24.0,<3.0.0)", "httpx (>=0.14.0,<0.15.0)", "email_validator (>=1.1.1,<2.0.0)", "sqlalchemy (>=1.3.18,<1.4.0)", "peewee (>=3.13.3,<4.0.0)", "databases[sqlite] (>=0.3.2,<0.4.0)", "orjson (>=3.2.1,<4.0.0)", "ujson (>=4.0.1,<5.0.0)", "async_exit_stack (>=1.0.1,<2.0.0)", "async_generator (>=1.10,<2.0.0)", "python-multipart (>=0.0.5,<0.0.6)", "aiofiles (>=0.5.0,<0.6.0)", "flask (>=1.1.2,<2.0.0)"]
|
|
|
|
[[package]]
|
|
name = "flatbuffers"
|
|
version = "1.12"
|
|
description = "The FlatBuffers serialization format for Python"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "*"
|
|
|
|
[[package]]
|
|
name = "gast"
|
|
version = "0.3.3"
|
|
description = "Python AST that abstracts the underlying Python version"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
|
|
|
|
[[package]]
|
|
name = "google-auth"
|
|
version = "1.30.0"
|
|
description = "Google Authentication Library"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*"
|
|
|
|
[package.dependencies]
|
|
cachetools = ">=2.0.0,<5.0"
|
|
pyasn1-modules = ">=0.2.1"
|
|
rsa = {version = ">=3.1.4,<5", markers = "python_version >= \"3.6\""}
|
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six = ">=1.9.0"
|
|
|
|
[package.extras]
|
|
aiohttp = ["aiohttp (>=3.6.2,<4.0.0dev)"]
|
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pyopenssl = ["pyopenssl (>=20.0.0)"]
|
|
reauth = ["pyu2f (>=0.1.5)"]
|
|
|
|
[[package]]
|
|
name = "google-auth-oauthlib"
|
|
version = "0.4.4"
|
|
description = "Google Authentication Library"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=3.6"
|
|
|
|
[package.dependencies]
|
|
google-auth = ">=1.0.0"
|
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requests-oauthlib = ">=0.7.0"
|
|
|
|
[package.extras]
|
|
tool = ["click (>=6.0.0)"]
|
|
|
|
[[package]]
|
|
name = "google-pasta"
|
|
version = "0.2.0"
|
|
description = "pasta is an AST-based Python refactoring library"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "*"
|
|
|
|
[package.dependencies]
|
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six = "*"
|
|
|
|
[[package]]
|
|
name = "grpcio"
|
|
version = "1.32.0"
|
|
description = "HTTP/2-based RPC framework"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "*"
|
|
|
|
[package.dependencies]
|
|
six = ">=1.5.2"
|
|
|
|
[package.extras]
|
|
protobuf = ["grpcio-tools (>=1.32.0)"]
|
|
|
|
[[package]]
|
|
name = "h11"
|
|
version = "0.12.0"
|
|
description = "A pure-Python, bring-your-own-I/O implementation of HTTP/1.1"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=3.6"
|
|
|
|
[[package]]
|
|
name = "h5py"
|
|
version = "2.10.0"
|
|
description = "Read and write HDF5 files from Python"
|
|
category = "main"
|
|
optional = false
|
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python-versions = "*"
|
|
|
|
[package.dependencies]
|
|
numpy = ">=1.7"
|
|
six = "*"
|
|
|
|
[[package]]
|
|
name = "idna"
|
|
version = "2.10"
|
|
description = "Internationalized Domain Names in Applications (IDNA)"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
|
|
|
|
[[package]]
|
|
name = "isort"
|
|
version = "5.8.0"
|
|
description = "A Python utility / library to sort Python imports."
|
|
category = "dev"
|
|
optional = false
|
|
python-versions = ">=3.6,<4.0"
|
|
|
|
[package.extras]
|
|
pipfile_deprecated_finder = ["pipreqs", "requirementslib"]
|
|
requirements_deprecated_finder = ["pipreqs", "pip-api"]
|
|
colors = ["colorama (>=0.4.3,<0.5.0)"]
|
|
|
|
[[package]]
|
|
name = "keras-preprocessing"
|
|
version = "1.1.2"
|
|
description = "Easy data preprocessing and data augmentation for deep learning models"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "*"
|
|
|
|
[package.dependencies]
|
|
numpy = ">=1.9.1"
|
|
six = ">=1.9.0"
|
|
|
|
[package.extras]
|
|
image = ["scipy (>=0.14)", "Pillow (>=5.2.0)"]
|
|
pep8 = ["flake8"]
|
|
tests = ["pandas", "pillow", "tensorflow", "keras", "pytest", "pytest-xdist", "pytest-cov"]
|
|
|
|
[[package]]
|
|
name = "markdown"
|
|
version = "3.3.4"
|
|
description = "Python implementation of Markdown."
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=3.6"
|
|
|
|
[package.extras]
|
|
testing = ["coverage", "pyyaml"]
|
|
|
|
[[package]]
|
|
name = "numpy"
|
|
version = "1.19.5"
|
|
description = "NumPy is the fundamental package for array computing with Python."
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=3.6"
|
|
|
|
[[package]]
|
|
name = "oauthlib"
|
|
version = "3.1.0"
|
|
description = "A generic, spec-compliant, thorough implementation of the OAuth request-signing logic"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
|
|
|
|
[package.extras]
|
|
rsa = ["cryptography"]
|
|
signals = ["blinker"]
|
|
signedtoken = ["cryptography", "pyjwt (>=1.0.0)"]
|
|
|
|
[[package]]
|
|
name = "opt-einsum"
|
|
version = "3.3.0"
|
|
description = "Optimizing numpys einsum function"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=3.5"
|
|
|
|
[package.dependencies]
|
|
numpy = ">=1.7"
|
|
|
|
[package.extras]
|
|
docs = ["sphinx (==1.2.3)", "sphinxcontrib-napoleon", "sphinx-rtd-theme", "numpydoc"]
|
|
tests = ["pytest", "pytest-cov", "pytest-pep8"]
|
|
|
|
[[package]]
|
|
name = "protobuf"
|
|
version = "3.15.8"
|
|
description = "Protocol Buffers"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "*"
|
|
|
|
[package.dependencies]
|
|
six = ">=1.9"
|
|
|
|
[[package]]
|
|
name = "pyasn1"
|
|
version = "0.4.8"
|
|
description = "ASN.1 types and codecs"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "*"
|
|
|
|
[[package]]
|
|
name = "pyasn1-modules"
|
|
version = "0.2.8"
|
|
description = "A collection of ASN.1-based protocols modules."
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "*"
|
|
|
|
[package.dependencies]
|
|
pyasn1 = ">=0.4.6,<0.5.0"
|
|
|
|
[[package]]
|
|
name = "pydantic"
|
|
version = "1.8.2"
|
|
description = "Data validation and settings management using python 3.6 type hinting"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=3.6.1"
|
|
|
|
[package.dependencies]
|
|
typing-extensions = ">=3.7.4.3"
|
|
|
|
[package.extras]
|
|
dotenv = ["python-dotenv (>=0.10.4)"]
|
|
email = ["email-validator (>=1.0.3)"]
|
|
|
|
[[package]]
|
|
name = "pyflakes"
|
|
version = "2.3.1"
|
|
description = "passive checker of Python programs"
|
|
category = "dev"
|
|
optional = false
|
|
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
|
|
|
|
[[package]]
|
|
name = "requests"
|
|
version = "2.25.1"
|
|
description = "Python HTTP for Humans."
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
|
|
|
|
[package.dependencies]
|
|
certifi = ">=2017.4.17"
|
|
chardet = ">=3.0.2,<5"
|
|
idna = ">=2.5,<3"
|
|
urllib3 = ">=1.21.1,<1.27"
|
|
|
|
[package.extras]
|
|
security = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)"]
|
|
socks = ["PySocks (>=1.5.6,!=1.5.7)", "win-inet-pton"]
|
|
|
|
[[package]]
|
|
name = "requests-oauthlib"
|
|
version = "1.3.0"
|
|
description = "OAuthlib authentication support for Requests."
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
|
|
|
|
[package.dependencies]
|
|
oauthlib = ">=3.0.0"
|
|
requests = ">=2.0.0"
|
|
|
|
[package.extras]
|
|
rsa = ["oauthlib[signedtoken] (>=3.0.0)"]
|
|
|
|
[[package]]
|
|
name = "rsa"
|
|
version = "4.7.2"
|
|
description = "Pure-Python RSA implementation"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=3.5, <4"
|
|
|
|
[package.dependencies]
|
|
pyasn1 = ">=0.1.3"
|
|
|
|
[[package]]
|
|
name = "six"
|
|
version = "1.15.0"
|
|
description = "Python 2 and 3 compatibility utilities"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
|
|
|
|
[[package]]
|
|
name = "starlette"
|
|
version = "0.14.2"
|
|
description = "The little ASGI library that shines."
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=3.6"
|
|
|
|
[package.extras]
|
|
full = ["aiofiles", "graphene", "itsdangerous", "jinja2", "python-multipart", "pyyaml", "requests"]
|
|
|
|
[[package]]
|
|
name = "tensorboard"
|
|
version = "2.5.0"
|
|
description = "TensorBoard lets you watch Tensors Flow"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">= 2.7, != 3.0.*, != 3.1.*"
|
|
|
|
[package.dependencies]
|
|
absl-py = ">=0.4"
|
|
google-auth = ">=1.6.3,<2"
|
|
google-auth-oauthlib = ">=0.4.1,<0.5"
|
|
grpcio = ">=1.24.3"
|
|
markdown = ">=2.6.8"
|
|
numpy = ">=1.12.0"
|
|
protobuf = ">=3.6.0"
|
|
requests = ">=2.21.0,<3"
|
|
tensorboard-data-server = ">=0.6.0,<0.7.0"
|
|
tensorboard-plugin-wit = ">=1.6.0"
|
|
werkzeug = ">=0.11.15"
|
|
|
|
[[package]]
|
|
name = "tensorboard-data-server"
|
|
version = "0.6.1"
|
|
description = "Fast data loading for TensorBoard"
|
|
category = "main"
|
|
optional = false
|
|
python-versions = ">=3.6"
|
|
|
|
[[package]]
|
|
name = "tensorboard-plugin-wit"
|
|
version = "1.8.0"
|
|
description = "What-If Tool TensorBoard plugin."
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "*"
|
|
|
|
[[package]]
|
|
name = "tensorflow"
|
|
version = "2.4.1"
|
|
description = "TensorFlow is an open source machine learning framework for everyone."
|
|
category = "main"
|
|
optional = false
|
|
python-versions = "*"
|
|
|
|
[package.dependencies]
|
|
absl-py = ">=0.10,<1.0"
|
|
astunparse = ">=1.6.3,<1.7.0"
|
|
flatbuffers = ">=1.12.0,<1.13.0"
|
|
gast = "0.3.3"
|
|
google-pasta = ">=0.2,<1.0"
|
|
grpcio = ">=1.32.0,<1.33.0"
|
|
h5py = ">=2.10.0,<2.11.0"
|
|
keras-preprocessing = ">=1.1.2,<1.2.0"
|
|
numpy = ">=1.19.2,<1.20.0"
|
|
opt-einsum = ">=3.3.0,<3.4.0"
|
|
protobuf = ">=3.9.2"
|
|
six = ">=1.15.0,<1.16.0"
|
|
tensorboard = ">=2.4,<3.0"
|
|
tensorflow-estimator = ">=2.4.0,<2.5.0"
|
|
termcolor = ">=1.1.0,<1.2.0"
|
|
typing-extensions = ">=3.7.4,<3.8.0"
|
|
wrapt = ">=1.12.1,<1.13.0"
|
|
|
|
[[package]]
|
|
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{file = "urllib3-1.26.4.tar.gz", hash = "sha256:e7b021f7241115872f92f43c6508082facffbd1c048e3c6e2bb9c2a157e28937"},
|
|
]
|
|
uvicorn = [
|
|
{file = "uvicorn-0.14.0-py3-none-any.whl", hash = "sha256:2a76bb359171a504b3d1c853409af3adbfa5cef374a4a59e5881945a97a93eae"},
|
|
{file = "uvicorn-0.14.0.tar.gz", hash = "sha256:45ad7dfaaa7d55cab4cd1e85e03f27e9d60bc067ddc59db52a2b0aeca8870292"},
|
|
]
|
|
werkzeug = [
|
|
{file = "Werkzeug-1.0.1-py2.py3-none-any.whl", hash = "sha256:2de2a5db0baeae7b2d2664949077c2ac63fbd16d98da0ff71837f7d1dea3fd43"},
|
|
{file = "Werkzeug-1.0.1.tar.gz", hash = "sha256:6c80b1e5ad3665290ea39320b91e1be1e0d5f60652b964a3070216de83d2e47c"},
|
|
]
|
|
wrapt = [
|
|
{file = "wrapt-1.12.1.tar.gz", hash = "sha256:b62ffa81fb85f4332a4f609cab4ac40709470da05643a082ec1eb88e6d9b97d7"},
|
|
]
|