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coolneng | e9582d0883 |
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@ -5,6 +5,7 @@ from Bio.SeqIO import parse
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from numpy.random import random
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from tensorflow import Tensor, int64
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from tensorflow.data import TFRecordDataset
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from tensorflow.data import AUTOTUNE, TFRecordDataset
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from tensorflow.io import TFRecordWriter, VarLenFeature, parse_single_example
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from tensorflow.sparse import to_dense
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from tensorflow.train import Example, Feature, Features, Int64List
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@ -104,7 +105,7 @@ def read_dataset(filepath) -> TFRecordDataset:
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Read TFRecords files and generate a dataset
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"""
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data_input = TFRecordDataset(filenames=filepath)
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dataset = data_input.map(map_func=process_input)
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dataset = data_input.map(map_func=process_input, num_parallel_calls=AUTOTUNE)
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shuffled_dataset = dataset.shuffle(buffer_size=10000, seed=42)
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batched_dataset = shuffled_dataset.batch(batch_size=BATCH_SIZE).repeat(count=EPOCHS)
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return batched_dataset
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