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coolneng e732fdada1
Update README 2021-07-07 00:07:41 +02:00
1 changed files with 3 additions and 3 deletions

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@ -58,7 +58,7 @@ contains all the needed dependencies.
The following command creates the trains the Deep Learning model and shows the accuracy and AUC:
```bash
poetry run python locimend/main.py train <data file> <label file>
poetry run python src/main.py train <data file> <label file>
```
- <data file>: FASTQ file containing the sequences with errors
@ -69,7 +69,7 @@ Both files must contain the canonical and read simulated sequences in the same p
A dataset is provided to train the model, in order to proceed execute the following command:
```bash
poetry run python locimend/main.py train data/curesim-HVR.fastq data/HVR.fastq
poetry run python src/main.py train data/curesim-HVR.fastq data/HVR.fastq
```
@ -85,7 +85,7 @@ A trained model is provided, which can be used to infer the correct sequences. T
The following command will infer the correct sequence, and print it:
```bash
poetry run python locimend/main.py infer "<DNA sequence>"
poetry run python src/main.py infer "<DNA sequence>"
```
#### REST API