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Add space to sequence ID for easier parsing

This commit is contained in:
coolneng 2021-04-21 21:02:56 +02:00
parent 35406497a3
commit fb5d781c66
Signed by: coolneng
GPG Key ID: 9893DA236405AF57
1 changed files with 1 additions and 1 deletions
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src/repertoire.r
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@ -13,7 +13,7 @@ generate_repertoire <- function(number_of_sequences) {
process_data <- function(data) { process_data <- function(data) {
dna_sequence <- Biostrings::DNAStringSet(data$sequence) dna_sequence <- Biostrings::DNAStringSet(data$sequence)
data$sequence <- Biostrings::reverseComplement(dna_sequence) data$sequence <- Biostrings::reverseComplement(dna_sequence)
names(data$sequence) <- paste(rownames(data), data$v_call, data$j_call) names(data$sequence) <- paste(rownames(data), data$v_call, data$j_call, " ")
Biostrings::writeXStringSet(data$sequence, "data/sequence.fasta") Biostrings::writeXStringSet(data$sequence, "data/sequence.fasta")
} }