From a67eb5a40cefabad7954eb78533d9830580219cf Mon Sep 17 00:00:00 2001
From: coolneng <akasroua@gmail.com>
Date: Tue, 6 Jul 2021 17:20:00 +0200
Subject: [PATCH] Bump nixpkgs revision

---
 .gitignore       |  1 +
 default.nix      | 22 ++++++++++++++++++++++
 docker.nix       | 11 +++++++++++
 nix/sources.json |  6 +++---
 4 files changed, 37 insertions(+), 3 deletions(-)
 create mode 100644 default.nix
 create mode 100644 docker.nix

diff --git a/.gitignore b/.gitignore
index 934e5d5..69edc3a 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1 +1,2 @@
 *.fastq
+result
diff --git a/default.nix b/default.nix
new file mode 100644
index 0000000..e65bb2d
--- /dev/null
+++ b/default.nix
@@ -0,0 +1,22 @@
+{ sources ? import ./nix/sources.nix, pkgs ? import sources.nixpkgs { } }:
+
+with pkgs;
+
+let
+  srcNoTarget = dir:
+    builtins.filterSource
+    (path: type: type != "directory" || builtins.baseNameOf path != "target")
+    dir;
+  src = srcNoTarget ./.;
+
+in stdenv.mkDerivation {
+  name = "locigenesis";
+  phases = "installPhase";
+
+  installPhase = ''
+    mkdir -p $out/bin
+    cp -r ${src}/src $out
+    cp -r ${src}/data/*.rds $out
+    cp ${src}/generation.sh $out
+  '';
+}
diff --git a/docker.nix b/docker.nix
new file mode 100644
index 0000000..8134f63
--- /dev/null
+++ b/docker.nix
@@ -0,0 +1,11 @@
+{ sources ? import ./nix/sources.nix, pkgs ? import sources.nixpkgs { } }:
+
+with pkgs;
+
+let locigenesis = pkgs.callPackage ./default.nix { };
+
+in dockerTools.buildImage {
+  name = "akasroua/locigenesis";
+  contents = [ locigenesis ];
+  config.Entrypoint = [ "${locigenesis}/bin/generation.sh" ];
+}
diff --git a/nix/sources.json b/nix/sources.json
index 1db69b6..51d340c 100644
--- a/nix/sources.json
+++ b/nix/sources.json
@@ -17,10 +17,10 @@
         "homepage": "",
         "owner": "NixOS",
         "repo": "nixpkgs",
-        "rev": "a565a2165ab6e195d7c105a8416b8f4b4d0349a4",
-        "sha256": "1x90qm533lh8xh172rqfcj3pwg8imyx650xgr41rqppmm6fli4w1",
+        "rev": "359e6542e1d41eb18df55c82bdb08bf738fae2cf",
+        "sha256": "05v28njaas9l26ibc6vy6imvy7grbkli32bmv0n32x6x9cf68gf9",
         "type": "tarball",
-        "url": "https://github.com/NixOS/nixpkgs/archive/a565a2165ab6e195d7c105a8416b8f4b4d0349a4.tar.gz",
+        "url": "https://github.com/NixOS/nixpkgs/archive/359e6542e1d41eb18df55c82bdb08bf738fae2cf.tar.gz",
         "url_template": "https://github.com/<owner>/<repo>/archive/<rev>.tar.gz"
     }
 }