From 7b15df761457d4d4da90b94c93c8a7bcb3e882c4 Mon Sep 17 00:00:00 2001
From: coolneng <akasroua@gmail.com>
Date: Wed, 10 Mar 2021 12:34:20 +0100
Subject: [PATCH] Simplify repertoire generation

---
 src/repertoire.r | 8 +++-----
 1 file changed, 3 insertions(+), 5 deletions(-)

diff --git a/src/repertoire.r b/src/repertoire.r
index 9cb5147..3be719e 100644
--- a/src/repertoire.r
+++ b/src/repertoire.r
@@ -2,14 +2,12 @@ library(immuneSIM)
 library(Biostrings)
 
 generate_repertoire <- function(number_of_sequences) {
-  b_chain <- immuneSIM(
+  return(immuneSIM(
     number_of_seqs = number_of_sequences,
     species = "hs",
     receptor = "tr",
-    chain = "b",
-    verbose = TRUE
-  )
-  return(b_chain)
+    chain = "b"
+  ))
 }
 
 # TODO save also v_call and j_call