Create a repertoire simulation prototype

2021-02-21 20:59:39 +01:00 · 2021-02-21 20:59:39 +01:00 · 6cb20a7b1e
parent 04936c47cc
commit 6cb20a7b1e
1 changed files with 13 additions and 0 deletions
--- a/src/repertoire.r
+++ b/src/repertoire.r
@ -0,0 +1,13 @@
+library(immuneSIM)
+
+sim_repertoire <- immuneSIM(
+  number_of_seqs = 1000,
+  species = "hs",
+  receptor = "tr",
+  chain = "b",
+  verbose = TRUE
+)
+
+save(sim_repertoire, file = "data/repertoire")
+
+plot_report_repertoire(sim_repertoire, output_dir = "data/reports")