diff --git a/README.org b/README.org index 9eba96e..7a312c4 100644 --- a/README.org +++ b/README.org @@ -6,9 +6,7 @@ locigenesis is a tool that generates an immune repertoire and runs it through a This project uses [[https://nixos.org/][Nix]] to ensure reproducible builds. -*** Using Nix - -1. Install Nix (compatible with MacOS and Linux): +1. Install Nix (compatible with MacOS, Linux and [[https://docs.microsoft.com/en-us/windows/wsl/about][WSL]]): #+begin_src shell curl -L https://nixos.org/nix/install | sh @@ -33,13 +31,5 @@ nix-shell #+end_src After running these commands, you will find yourself in a shell that contains all the needed dependencies. -*** Without Nix - -The following dependencies need to be installed: - -- R -- [[https://github.com/GreiffLab/immuneSIM/][immuneSIM]] -- [[https://github.com/tidyverse/stringr][stringr]] -- Java Development Kit (JDK) ** Usage