From 35406497a3d92225166c02c07eba7b6f56a8d08a Mon Sep 17 00:00:00 2001 From: coolneng Date: Wed, 21 Apr 2021 20:11:56 +0200 Subject: [PATCH] Format generation script --- generation.sh | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/generation.sh b/generation.sh index 1bf9f3d..dfb62e1 100755 --- a/generation.sh +++ b/generation.sh @@ -19,5 +19,6 @@ fastq=".fastq" filename="sequence" prefix="curesim_" -Rscript src/repertoire.r "$sequences" && java -jar tools/CuReSim.jar -n $((number_of_reads * sequences)) -m "$read_mean_size" -sd "$read_variance_size" -f "$data_directory$filename$fasta" -o "$data_directory$prefix$filename$fastq" +Rscript src/repertoire.r "$sequences" && + java -jar tools/CuReSim.jar -n $((number_of_reads * sequences)) -m "$read_mean_size" -sd "$read_variance_size" -f "$data_directory$filename$fasta" -o "$data_directory$prefix$filename$fastq" rm "$data_directory/log.txt"